参考文献

[1]　Suflita J M, Davidova I A, Gieg L M, et al. Anaerobic hydrocarbon biodegradation and the prospects for microbial enhanced energy production[M].Amsterdam: Elsevier Science, 2004：283-305.

[2]　Rowe D, Muehlenbachs A. Low-temperature thermal generation of hydrocarbon gases in shallow shales[J]. Nature，1999, 398（6722）: 61-63.

[3]　Parkes J. Cracking anaerobic bacteria[J]. Nature, 1999，401（6750）: 217-218.

[4]　Hallmann C, Schwark L, Grice K. Community dynamics of anaerobic bacteria in deep petroleum reservoirs[J]. Nature Geoscience, 2008, 1（9）: 588-591.

[5]　Head I M, Jones D M, Larter S R. Biological activity in the deep subsurface and the origin of heavy oil[J]. Nature, 2003, 426（6964）: 344-352.

[6]　Jackson B E, McInerney M J. Anaerobic microbial metabolism can proceed close to thermodynamic limits[J]. Nature, 2002, 415（6870）: 454-456.

[7]　Larter S R, Wilhelms A, Head I M, et al. The controls on the composition of biodegraded oils in the deep subsurface. Part 1: biodegradation rates in petroleum reservoirs[J].Organic Geochemistry, 2003, 34（4）: 601-613.

[8]　Jennings E, Tanner R. The Effects of a bacillus biosurfactant on methanogenic hexadecane degradation[J]. Bioremediation Journal, 2004, 8（1/2）: 79 86.

[9]　Gieg L M, Duncan K E, Suflita J M. Bioenergy production via microbial conversion of residual oil to natural gas[J]. Appied and Environmental Microbiology, 2008, 74（10）: 3022-3029.

[10]　Youssef N, Elshahed M S, McInerney M J. Microbial process in oil fields: culprits, problems and opportunities, advances in applied microbiology[M]. Amsterdam: Elsevier Academic Press, 2008：141-251.

[11]　Belyaev S S, Borzenkov I A, Nazina T N, et al. Use of microorganisms in the biotechnology for the enhancement of oil recovery[J]. Microbiology, 2004, 73（5）: 590-598.

[12]　McInerney M J, Nagle D P, Knapp R M. Microbially enhanced oil recovery: past, present and future[M]. Petroleum Microbiology, 2005: 215-237.

[13]　王俊， 俞理， 黄立信. 油藏生物气研究进展[J]. 特种油气藏， 2010, 05（4）: 8-12.

[14]　王万春，陶明信. 地质微生物作用与油气资源[J].地质通报，2005, 24（10-11）: 1022-1026.

[15]　李赞豪， 李季， 向龙斌， 等. 原油的厌氧细菌降解作用及其产物特征[J].石油与天然气地质， 1998, 19（1）: 29-34.

[16]　张水昌， 赵文智， 李先奇， 等. 生物气研究新进展与勘探策略[J]. 石油勘探与开发， 2005, 04（3）: 90-96.

[17]　汪卫东， 王静， 耿雪丽， 等. 储层残余油生物气化技术现状与展望[J]. 石油地质与工程， 2012, 01（2）: 78-81.

[18]　Muller F M. On methane fermentation of higher alkanes[J]. Antonie van Leeuwenhoek, 1957, 23（1）: 369-384.

[19]　Jack T R, Lee E, Mueller J. Anaerobic gas production from crude oil[J]. Microbes and Oil Recovery: International Bioresources Journal, 1985, 1（1）: 167-180.

[20]　Zengler K, Richnow H H, Rossello-Mora R, et al. Methane formation from long-chain alkanes by anaerobic microorganisms[J]. Nature, 1999, 401（6750）: 266–269.

[21]　Anderson R T, Lovley D R. Hexadecane decay by methanogenesis[J]. Nature, 2000, 404（13）: 722–723.

[22]　Townsend G T, Prince R C, Suflita J M. Anaerobic oxidation of crude oil hydrocarbons by the resident microorganisms of a contaminated anoxic aquifer[J]. Environmental Sci ence and Technology, 2003, 37（22）: 5213–5218.

[23]　Siddique T, Fedorak P M, Foght J M. Biodegradation of short-chain n-alkanes in oil sands tailings under methanogenic conditions[J]. Environmental Science and Technology, 2006, 40（17）: 5459–5464.

[24]　Jones D M, Head I M, Gray N D, et al. Crude oil biodegradation via methanogenesis in subsurface petroleum reservoirs[J]. Nature, 2008, 451（7175）: 176–181.

[25]　Röling W F M, Head I M, Larter S R. The microbiology of hydrocarbon degradation in subsurface petroleum reservoirs: perspectives and prospects[J]. Research in Microbiology, 2003, 154（5）: 321-328.

[26]　Milkov A V, Dzou L. Geochemical evidence of secondary microbial methane from very slight biodegradation of undersaturated oils in a deep hot reservoir[J]. Geology, 2007, 35（5）: 455–458.

[27]　Bastin E S，Greer F E，Merritt C A，et al.The presence of sulphate reducing bacteria in oil field waters[J].Science，1926，63（1618）：21-24.

[28]　Nazina T N, Shestakova N M, Grigor’yan A A, et al. Phylogenetic diversity and activity of anaerobic microorganisms of high-temperature horizons of the Dagang oil field （PR China）[J]. Microbiology, 2006, 75（1）: 55-65.

[29]　Magot M. Indigenous microbial communities in oil fields, petroleum microbiology[M]. Washington DC: ASM Press, 2005: 21-33.

[30]　Lovley D R，Baedecker M J，Lonergan D J，et al.Oxidation of aromatic contaminants coupled to microbial iron reduction[J].Nature，1989，339（6222）：297-300.

[31]　Gray N.D., Sherry A.， Larter S.R., et al. Biogenic methane production in formation waters from a large gas field in the North Sea[J]. Extremophiles, 2009, 13（3）: 511-519.

[32]　Duncan K.E., Gieg L.M., Parisi V.A., et al. Biocorrosive thermophilic microbial communities in Alaskan North Slope oil facilities[J]. Environmental Science and Technology, 2009, 43（20）: 7977-7984.

[33]　Aitken C.M., Jones D.M., Larter S.R. Anaerobic hydrocarbon biodegradation in deep subsurface oil reservoirs[J]. Nature, 2004, 431（7006）: 291-294.

[34]　冯一潇. 油藏发酵细菌的鉴定及石油烃厌氧生物代谢机理初探[D]. 北京： 中国农业科学院， 2009.

[35]　承磊. 石油烃厌氧生物降解过程中的产甲烷古菌研究[D]. 北京： 中国农业科学院， 2007.

[36]　刘金峰，牟伯中. 油藏极端环境中的微生物[J]. 微生物学杂志， 2004, 24（4）: 31-34.

[37]　黎霞. 油藏发酵细菌的鉴定及石油烃厌氧生物降解研究[D]. 北京： 中国农业科学院， 2008.

[38]　吴伟林. 石油烃厌氧降解菌的筛选及其降解特性研究[D]. 青岛： 中国石油大学（华东）, 2011.

[39]　Mbadinga Serge Maurice. 高温油藏微生物群落结构及石油烃厌氧降解产甲烷体系构建研究[D]. 上海： 华东理工大学， 2012.

[40]　麻婷婷. 乙酸和硫酸盐对石油烃降解产甲烷过程影响的研究[D].北京： 中国农业科学院， 2014.

[41]　周蕾. 厌氧烃降解产甲烷菌系的组成及其代谢产物的特征[D]. 上海： 华东理工大学， 2012.

[42]　何乔. 烃类化合物厌氧降解产甲烷中间代谢产物初探[D]. 北京： 中国农业科学院， 2013.

[43]　王立影. 烷烃厌氧降解产甲烷体系菌群结构与功能的研究[D].上海： 华东理工大学， 2011.

[44]　丁晨. 低温石油烃降解产甲烷富集物的培养及微生物群落结构分析[D].北京： 中国农业科学院， 2013.

[45]　李凯平. 长链烷烃厌氧降解产甲烷体系的菌群组成及变化[D].上海： 华东理工大学， 2012.

[46]　Bauschlicher J.R., Langhoff S.R. Bond dissociation energies for substituted polycyclic aromatic hydrocarbons and their cations[J]. Molecular Physics, 1999, 96（4）: 471-476.

[47]　Widdel F.， Rabus R. Anaerobic biodegradation of saturated and aromatic hydrocarbons[J]. Current Opinion Biotechnology, 2001, 12（3）: 259-276.

[48]　王俊. 油藏产气微生物代谢机理研究[D]. 北京： 中国科学院研究生院（渗流流体力学研究所）, 2011.

[49]　Dolfing J.， Larter S.R., Head I.M. Thermodynamic constraints on methanogenic crude oil biodegradation[J]. The ISME Journal, 2008, 2（4）: 442-452.

[50]　Westerholm M. Biogas production through the syntrophic acetate-oxidising pathway: Characterization and detection of syntrophic acetate-oxidising bacteria[M]. Uppsala: Swedish University of Agricultural Sciences, 2012：15-29.

[51]　朱光有， 张水昌， 赵文智， 等. 中国稠油区浅层天然气地球化学特征与成因机制[J]. 中国科学： D 辑， 2008, 37（A02）: 80-89.

[52]　Roling W.F.M., Head I.M., Larter S.R. The microbiology of hydrocarbon degradation in subsurface petroleum reservoirs: perspectives and prospects[J]. Research in Microbiology, 2003, 154（5）: 321-328.

[53]　Chakraborty R.， Coates J.D. Anaerobic degradation of monoaromatic hydrocarbons[J].Applied Microbiology and Biotechnology, 2004, 64（4）: 437-446.

[54]　Lovley D.R., Baedecker M.J., Lonergan D.J., et al. Oxidation of aromatic contaminants coupled to microbial iron reduction[J]. Nature, 1989, 339（6222）: 297-300.

[55]　Aeckersberg F.， Bak F.， Widdel F. Anaerobic oxidation of saturated hydrocarbons to CO₂ by a new type of sulfate-reducing bacterium[J]. Archives of Microbiology, 1991, 156（1）: 5-14.

[56]　Heider J.， Spormann A.M., Beller H.R., et al. Anaerobic bacterial metabolism of hydrocarbons[J]. FEMS Microbiology Reviews, 1999, 22（5）: 459-473.

[57]　Spormann A.M., Widdel F. Metabolism of alkylbenzenes, alkanes, and other hydrocarbons in anaerobic bacteria[J]. Biodegradation, 2000, 11（2/3）: 85-105.

[58]　Widdel F.， Boetius A.， Rabus R. Anaerobic biodegradation of hydrocarbons including methane, the Prokaryotes: Archaea. Bacteria: Firmicutes, Actinomycetes[M]. New York: Springer, 2006: 1028-1049.

[59]　Grossi V.， Cravo-Laureau C.， Guyoneaud R.， et al. Metabolism of n-alkanes and n-alkenes by anaerobic bacteria: a summary[J]. Organic Geochemistry, 2008, 39（8）: 1197-1203.

[60]　Mbadinga S.M., Wang L.Y., Zhou L.， et al. Microbial communities involved in anaerobic degradation of alkanes[J]. International Biodeterioration and Biodegradation, 2011, 65（1）: 1-13.

[61]　Bastin E.S., Greer F.E., Merritt C.A., et al. The presence of sulphate reducing bacteria in oil field waters[J]. Science, 1926, 63（1618）: 21-24.

[62]　Magot M.， Ollivier B.， Patel B.K.C. Microbiology of Petroleum reservoirs[J]. Antonievan LeeuwenLhoek, 2000, 77（2）: 103-116.

[63]　Miranda-Tello E.， Fardeau M.L., Sepúlveda J.， et al. Garciella nitratireducens gen. nov., sp. nov., an anaerobic, thermophilic, nitrate-and thiosulfate-reducing bacterium isolated from an oilfield separator in the Gulf of Mexico[J]. International Journal of Systematic and Evolutionary Microbiology, 2003, 53（5）: 1509-1514.

[64]　Foght J. Anaerobic biodegradation of aromatic hydrocarbons: pathways and prospects[J].Journal of Molecular Microbiology and Biotechnology, 2008, 15（2-3）: 93-120.

[65]　胡恒宇， 顾贵洲， 张强， 赵东风， 等. 残余油微生物气化产甲烷菌群的研究进展[J]. 化学与生物工程， 2014, 31（4）: 9-14.

[66]　Rabus R.， Fukui M.， Wilkes H.， et al. Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an anaerobic enrichment culture utilizing alkylbenzenes from crude oil[J]. Applied and Environmental Microbiology, 1996, 62（10）: 3605-3613.

[67]　Rueter P.， Rabus R.， Wilkes H.， Aeekersberg F.A., et al. Anaerobic oxidation of hydrocarbons in crude oil by new types of sulphate-reducing bacteria[J].Nature, 1994, 372（6505）: 455-458.

[68]　So C.M., Young L.Y. Initial reactions in anaerobic alkane degradation by a sulfate reducer, strain AK-01[J]. Applied and Environmental Microbiology, 1999, 65（12）: 5532-5540.

[69]　Cravo-Laureau C.， Matheron R.， Joulian C.， Cayol J.L. Desulfatibacillum alkenivorans sp. nov., a novel n-alkene-degrading, sulfate-reducing bacterium, and emended description of the genus Desulfatibacillum[J]. International Journal of Systematic and Evolutionary Microbiology, 2004, 54（11）: 1639-1642.

[70]　Musat F.， Galushko A.， Jacob J.， et al. Anaerobic degradation of naphthalene and 2-methylnaphthalene by strains of marine sulfate-reducing bacteria[J]. Environmental Microbiology, 2009, 11（1）: 209-214.

[71]　Dolfing J.， Zeyer J.， Binder-Eicher P.， et al. Isolation and characterization of a bacterium that mineralizes toluene in the absence of molecular oxygen[J]. Archives of Microbiology, 1990, 154（4）: 336-341.

[72]　Westerholm M. Biogas production through the syntrophic acetate-oxidising pathway[M].Amsterdam: Elsevier Science, 2012：67-86.

[73]　Ziganshin A.M., Schmidt T.， Scholwin F.， et al. Bacteria andarchaea involved in anaerobic digestion of distillers grains with solubles[J]. Applied Microbiology and Biotechnology, 2011, 89（6）: 2039-2052.

[74]　Widdel F.， Boetius A.， Rabus R. Anaerobic Biodegradation of Hydrocarbons Including Methane[J]. Prokaryotes, 2006, 1（2）: 323-335.

[75]　蔡云. 石油烃厌氧降解微生物特征及产甲烷古菌研究[D]. 青岛： 中国石油大学（华东），2013.

[76]　张强. 稠油油藏甲烷化内源微生物激活条件研究[D]. 青岛： 中国石油大学（华东）, 2014.

[77]　李政. 耐热石油降解混合菌群降解特性及多环芳烃共代谢作用的研究[D]. 青岛：中国石油大学（华东）, 2012.

[78]　顾贵州. 石油烃厌氧降解微生物的DGGE分析及产甲烷效率研究[D]. 青岛： 中国石油大学（华东）, 2015.

[79]　Hu H.Y., Zhao D.F., Zhang Q. Effect of Eutrophic River Water and Trace Element on Oil Gasification into Methane by Indigenous Microbes[J]. Biotechnology, 2015，14（1）: 29-35.

[80]　李慧， 陈冠雄， 杨涛， 等. 沈抚灌区含油污水灌溉对稻田土壤微生物种群及土壤酶活性的影响[J]. 应用生态学报， 2005, 16（7）: 1355-1359.

[81]　Boopathy R. Use of anaerobic soil slurry reactors for the removal of petroleum hydrocarbons in soil[J]. International Biodeterioration and Biodegradation, 2003, 52（3）: 161-166.

[82]　刘晓玲.城市污泥厌氧发酵产酸条件优化及其机理研究[D]. 无锡：江南大学， 2009.

[83]　Mishra S.， Jyot J.， Kuhad R.C., et al. Evaluation of inoculum addition to stimulate in situ bioremediation of oil sludge-contaminated soil[J]. Applied and Environmental Microbiology, 2001, 67（4）: 1675-1681.

[84]　刘春爽， 赵东风， 吴文华， 等. 芦苇修复新疆石油污染土壤效果[J]. 中国石油大学学报（自然科学版）, 2012, 36（2）: 186-190.

[85]　马可. 水稻土中甲烷循环的微生物学机理及其主要调控因子[D]. 北京： 中国农业大学， 2010.

[86]　李政， 赵朝成， 张云波， 等. 16 种 EPA-PAHs 复合污染土壤的菌群修复[J]. 中国石油大学学报（自然科学版）, 2012, 36（1）: 175-181.

[87]　Lin T.C., Pan P.T., Cheng S.S. Exsitu bioremediation of oil-contaminated soil[J]. Journal of Hazardous Materials, 2010, 176（1）: 27-34.

[88]　彭先芝， 张干， 陈繁忠， 等. 好氧生物降解中烷烃单体稳定同位素分馏及其环境意义[J].科学通报， 2004, 49（24）: 2605-2611

[89]　齐永强， 王红旗， 刘敬奇. 土壤中石油污染物微生物降解及其降解去向[J]. 中国工程科学， 2003, 5（8）: 70-75.

[90]　Fardeau M.L., Ollivier B.， Patel B.K.C., et al. Thermotoga hypogea sp. nov” a xylanolytic, thermophilic bacterium from an oil-producing well[J]. International Journal of Systematic Bacteriology, 1997, 47（4）: 1013-1019

[91]　Plugge C.M., Balk M.， Zoetendal E.G., et al. Gelria glutamica gen. nov” sp. nov” a thermophilic, obligately syntrophic, glutamate-degrading anaerobe[J]. International Journal of Systematic and Evolutionary Microbiology, 2002, 52（2）: 401-407

[92]　Staley B.F., Francis L.， Barlaz M.A. Effect of spatial differences in microbial activity, pH, and substrate levels on methanogenesis initiation in refuse[J]. Applied and Environmental Microbiology, 2011, 77（7）: 2381-2391.

[93]　贾仲军. 稳定性同位素核酸探针技术 DNA-SIP 原理与应用[J]. 微生物学报， 2011, 51（12）: 1585-1594.

[94]　张琴， 荚荣， 豆长明， 等. 重金属污染土壤总 DNA 提取方法的研究—土壤预处理和硫酸铵铝在 DNA 提取中的应用[J]. 微生物学通报， 2014, 41（1）: 191-199.

[95]　Blume F.， Bergmann I.， Nettmann E.， et al. Methanogenic population dynamics during semi‐continuous biogas fermentation and acidification by overloading[J]. Journal of Applied Microbiology, 2010, 109（2）: 441-450.

[96]　Feng X.M., Karlsson A.， Svensson B.H., Bertilsson S. Impact of trace element addition on biogas production from food industrial waste–linking process to microbial communities[J]. FEMS Microbiology Ecology, 2010, 74（1）: 226-240.

[97]　Fotidis I.A., Karakashev D.， Kotsopoulos T.A., et al. Effect of ammonium and acetate on methanogenic pathway and methanogenic community composition[J]. FEMS Microbiology Ecology, 2013, 83（1）: 38-48.

[98]　Hao L.P., Lu F.， He P.J., et al. Predominant contribution of syntrophic acetate oxidation to thermophilic methane formation at high acetate concentrations[J]. Environmental Science and Technology, 2010, 45（2）: 508-513.

[99]　Cereal Genomics: Methods and Protocols[Z]. Human Press, 2014.

[100]　傅霖， 辛明秀. 产甲烷菌的生态多样性及工业应用[J]. 应用与环境生物学报， 2009, 15（4）: 574-578.

[101]　龙胜祥， 陈纯芳， 李辛子， 等. 中国石化煤层气资源发展前景[J]. 石油与天然气地质， 2011, 03（4）: 481-488.

[102]　Lowe D.C. Global change: A green source of surprise[J]. Nature, 2006, 439（7073）: 148-149.

[103]　程海鹰， 肖生科， 马光东， 等. 营养注入后油藏微生物群落16SrRNA基因的T-RFLP对比分析[J]. 石油勘探与开发， 2006, 33（3）: 356-359.

[104]　Ferry J.G. Methane：small molecule, big impact[J]. Science, 1997, 278（5342）: 13-14.

[105]　Belyaev S.S., Wolkin R.， Kenealy W.R., et al. Methanogenic bacteria from the Bondyuzhskoe oil field: general characterization and analysis of stable-carbon isotopic fractionation[J]. Applied and Environmental Microbiology, 1983, 45（2）: 691-697.

[106]　Ivanov M.V., Belyaev S.S., Zyakun A.M., et al. Microbiological formation of methane in the oil-field development[J]. Geokhimiya, 1983 （11）: 1647-1654.

[107]　Ravot G.， Magot M.， Fardeau M.L., et al. Thermotoga elfii sp. nov., a novel thermophilic bacterium from an African oil-producing well[J]. International Journal of Systematic Bacteriology, 1995, 45（2）: 308-314.　

[108]　Nilsen R.K., Torsvik T. Methanococcus thermolithotrophicus Isolated from North Sea Oil Field Reservoir Water[J]. Applied and Environmental Microbiology, 1996, 62（2）: 728-731.

[109]　Ollivier B.， Cayol J.L., Patel B.K.C., et al. Methanoplanus petrolearius sp. nov., a novel methanogenic bacterium from an oil-producing well[J]. FEMS Microbiology Letters, 1997, 147（1）: 51-56.

[110]　Ollivier B.， Fardeau M.L., Cayol J.L., et al. Methanocalculus halotolerans gen. nov., sp. nov., isolated from an oil-producing well[J]. International Journal of Systematic Bacteriology, 1998, 48（3）: 821-828.

[111]　Obraztsova A.Y., Shipin O.V., Bezrukova L.V., et al. Properties of the coccoid methylotrophic methanogen, methanococcoides-euhalobius sp-nov[J]. Microbiology, 1987, 56（4）: 523-527.

[112]　Davidova I.A., Hannsen H.J.M., Stams A.J.M., et al. Taxonomic description of Methanococcoides euhalobius and its transfer to the Methanohalophilus genus[J]. Ailtonie van Leeuwenhoek, 1997, 71（4）：313-318.

[113]　Ni S.S., Boone D.R. Isolation and characterization of a dimethyl sulfide-degrading methanogen, Methanolobus siciliae HI350, from an oil wel, characterization of Msieiliae T4/MT, and emendation of M.sieiliae[J]. International Journal of Systematic and Evolutionary Microbiology 1991, 41（3）：410-416.